Computer Vision News - March 2020

2 Summary We Tried for You 18 Note: for this to work you will need to extract the nifty image first; the brain extraction will be saved in a compressed format. If we want to create now a binarized version of the extracted brain, we will type: If we’d rather have both, only the -m option should be included. The first directory refers to the input image, while the second specifies the name of the brain extraction output. The mask will be automatically saved as output as specified followed by _mask.nii . To visualise the results obtained, we can now use the FSLeyes tool. We can start by loading the structural brain image: bet Downloads/structural.nii Downloads/structural_brain.nii bet Downloads/structural.nii Downloads/structural_brain.nii -m -n fsleyes Downloads/structural.nii This should open a window with the top bar filled with different options and a bottom overlay list and location tabs. "FSL is a multi-use software tool which can fit several imaging tasks" Figure 2